Automated mortality surveillance in south-eastern Ontario for pandemic influenza preparedness.
Identifieur interne : 000C94 ( Main/Exploration ); précédent : 000C93; suivant : 000C95Automated mortality surveillance in south-eastern Ontario for pandemic influenza preparedness.
Auteurs : Cary Fan [Canada] ; Adam Van Dijk ; Dillan Fernando ; Justin N. Hall ; Aaron Wynn ; Ian Gemmill ; Kieran Michael MooreSource :
- Canadian journal of public health = Revue canadienne de sante publique [ 0008-4263 ]
Descripteurs français
- KwdFr :
- MESH :
- isolement et purification : Sous-type H1N1 du virus de la grippe A.
- mortalité : Grippe humaine.
- épidémiologie : Ontario.
- Administration de la santé publique, Flambées de maladies, Grippe humaine, Humains, Informatique en santé publique, Surveillance de la population.
English descriptors
- KwdEn :
- Disease Outbreaks (prevention & control), Humans, Influenza A Virus, H1N1 Subtype (isolation & purification), Influenza, Human (mortality), Influenza, Human (prevention & control), Ontario (epidemiology), Population Surveillance (methods), Public Health Administration (methods), Public Health Informatics (methods).
- MESH :
- geographic , epidemiology : Ontario.
- isolation & purification : Influenza A Virus, H1N1 Subtype.
- methods : Population Surveillance, Public Health Administration, Public Health Informatics.
- mortality : Influenza, Human.
- prevention & control : Disease Outbreaks, Influenza, Human.
- Humans.
Abstract
BACKGROUND
The recent Canadian experience with pandemic H1N1 (pH1N1) influenza in 2009 highlighted the need for enhanced surveillance at local and regional levels to support evidence-based decision making by physicians and public health. We describe the rationale, methodology, and provide preliminary findings from the implementation of an automated Mortality Surveillance System (MSS) in the Kingston, Frontenac and Lennox & Addington (KFL&A) health unit.
METHODS
The MSS utilized an automated web-based framework with secure data transfer. A data sharing agreement between the local Medical Officer of Health and the City of Kingston facilitated weekly updates of mortality data. Deaths due to influenza were classified using keywords in the cause of death and a phonetic algorithm to capture alternate spellings. Anomaly detection was modeled on the modified cumulative sum algorithm implemented in the Early Aberration Reporting System.
RESULTS
Retrospective analysis of municipal mortality data over a 10-year period established baseline mortality rates in the region. MSS data monitored during the pH1N1 influenza season showed no significant impact on the burden or timing of mortality in the KFL&A health unit.
CONCLUSION
Municipal data enabled surveillance of mortality in the KFL&A region with weekly updates. Other municipalities may participate in this surveillance project using the Kingston model without significant ongoing investment. Efforts to improve data quality at the physician and transcription level are ongoing. Integration of mortality data and other real-time data streams into an integrated electronic public health dashboard could provide decision-makers with timely information during public health emergencies.
PubMed: 21370781
Affiliations:
Links toward previous steps (curation, corpus...)
Le document en format XML
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Hall</name></author><author><name sortKey="Wynn, Aaron" sort="Wynn, Aaron" uniqKey="Wynn A" first="Aaron" last="Wynn">Aaron Wynn</name></author><author><name sortKey="Gemmill, Ian" sort="Gemmill, Ian" uniqKey="Gemmill I" first="Ian" last="Gemmill">Ian Gemmill</name></author><author><name sortKey="Moore, Kieran Michael" sort="Moore, Kieran Michael" uniqKey="Moore K" first="Kieran Michael" last="Moore">Kieran Michael Moore</name></author></titleStmt><publicationStmt><idno type="wicri:source">PubMed</idno><date when="????"><PubDate><MedlineDate>2010 Nov-Dec</MedlineDate></PubDate></date><idno type="RBID">pubmed:21370781</idno><idno type="pmid">21370781</idno><idno type="wicri:Area/Main/Corpus">000546</idno><idno type="wicri:explorRef" wicri:stream="Main" wicri:step="Corpus" wicri:corpus="PubMed">000546</idno><idno type="wicri:Area/Main/Curation">000546</idno><idno type="wicri:explorRef" wicri:stream="Main" wicri:step="Curation">000546</idno><idno type="wicri:Area/Main/Exploration">000546</idno></publicationStmt><sourceDesc><biblStruct><analytic><title xml:lang="en">Automated mortality surveillance in south-eastern Ontario for pandemic influenza preparedness.</title><author><name sortKey="Fan, Cary" sort="Fan, Cary" uniqKey="Fan C" first="Cary" last="Fan">Cary Fan</name><affiliation wicri:level="1"><nlm:affiliation>Queen's University, Kingston, ON. cary.fan@queensu.ca</nlm:affiliation><country wicri:rule="url">Canada</country></affiliation></author><author><name sortKey="Van Dijk, Adam" sort="Van Dijk, Adam" uniqKey="Van Dijk A" first="Adam" last="Van Dijk">Adam Van Dijk</name></author><author><name sortKey="Fernando, Dillan" sort="Fernando, Dillan" uniqKey="Fernando D" first="Dillan" last="Fernando">Dillan Fernando</name></author><author><name sortKey="Hall, Justin N" sort="Hall, Justin N" uniqKey="Hall J" first="Justin N" last="Hall">Justin N. Hall</name></author><author><name sortKey="Wynn, Aaron" sort="Wynn, Aaron" uniqKey="Wynn A" first="Aaron" last="Wynn">Aaron Wynn</name></author><author><name sortKey="Gemmill, Ian" sort="Gemmill, Ian" uniqKey="Gemmill I" first="Ian" last="Gemmill">Ian Gemmill</name></author><author><name sortKey="Moore, Kieran Michael" sort="Moore, Kieran Michael" uniqKey="Moore K" first="Kieran Michael" last="Moore">Kieran Michael Moore</name></author></analytic><series><title level="j">Canadian journal of public health = Revue canadienne de sante publique</title><idno type="ISSN">0008-4263</idno></series></biblStruct></sourceDesc></fileDesc><profileDesc><textClass><keywords scheme="KwdEn" xml:lang="en"><term>Disease Outbreaks (prevention & control)</term><term>Humans</term><term>Influenza A Virus, H1N1 Subtype (isolation & purification)</term><term>Influenza, Human (mortality)</term><term>Influenza, Human (prevention & control)</term><term>Ontario (epidemiology)</term><term>Population Surveillance (methods)</term><term>Public Health Administration (methods)</term><term>Public Health Informatics (methods)</term></keywords><keywords scheme="KwdFr" xml:lang="fr"><term>Administration de la santé publique ()</term><term>Flambées de maladies ()</term><term>Grippe humaine ()</term><term>Grippe humaine (mortalité)</term><term>Humains</term><term>Informatique en santé publique ()</term><term>Ontario (épidémiologie)</term><term>Sous-type H1N1 du virus de la grippe A (isolement et purification)</term><term>Surveillance de la population ()</term></keywords><keywords scheme="MESH" type="geographic" qualifier="epidemiology" xml:lang="en"><term>Ontario</term></keywords><keywords scheme="MESH" qualifier="isolation & purification" xml:lang="en"><term>Influenza A Virus, H1N1 Subtype</term></keywords><keywords scheme="MESH" qualifier="isolement et purification" xml:lang="fr"><term>Sous-type H1N1 du virus de la grippe A</term></keywords><keywords scheme="MESH" qualifier="methods" xml:lang="en"><term>Population Surveillance</term><term>Public Health Administration</term><term>Public Health Informatics</term></keywords><keywords scheme="MESH" qualifier="mortality" xml:lang="en"><term>Influenza, Human</term></keywords><keywords scheme="MESH" qualifier="mortalité" xml:lang="fr"><term>Grippe humaine</term></keywords><keywords scheme="MESH" qualifier="prevention & control" xml:lang="en"><term>Disease Outbreaks</term><term>Influenza, Human</term></keywords><keywords scheme="MESH" qualifier="épidémiologie" xml:lang="fr"><term>Ontario</term></keywords><keywords scheme="MESH" xml:lang="en"><term>Humans</term></keywords><keywords scheme="MESH" xml:lang="fr"><term>Administration de la santé publique</term><term>Flambées de maladies</term><term>Grippe humaine</term><term>Humains</term><term>Informatique en santé publique</term><term>Surveillance de la population</term></keywords></textClass></profileDesc></teiHeader><front><div type="abstract" xml:lang="en"><p><b>BACKGROUND</b></p><p>The recent Canadian experience with pandemic H1N1 (pH1N1) influenza in 2009 highlighted the need for enhanced surveillance at local and regional levels to support evidence-based decision making by physicians and public health. We describe the rationale, methodology, and provide preliminary findings from the implementation of an automated Mortality Surveillance System (MSS) in the Kingston, Frontenac and Lennox & Addington (KFL&A) health unit.</p></div><div type="abstract" xml:lang="en"><p><b>METHODS</b></p><p>The MSS utilized an automated web-based framework with secure data transfer. A data sharing agreement between the local Medical Officer of Health and the City of Kingston facilitated weekly updates of mortality data. Deaths due to influenza were classified using keywords in the cause of death and a phonetic algorithm to capture alternate spellings. Anomaly detection was modeled on the modified cumulative sum algorithm implemented in the Early Aberration Reporting System.</p></div><div type="abstract" xml:lang="en"><p><b>RESULTS</b></p><p>Retrospective analysis of municipal mortality data over a 10-year period established baseline mortality rates in the region. MSS data monitored during the pH1N1 influenza season showed no significant impact on the burden or timing of mortality in the KFL&A health unit.</p></div><div type="abstract" xml:lang="en"><p><b>CONCLUSION</b></p><p>Municipal data enabled surveillance of mortality in the KFL&A region with weekly updates. Other municipalities may participate in this surveillance project using the Kingston model without significant ongoing investment. Efforts to improve data quality at the physician and transcription level are ongoing. Integration of mortality data and other real-time data streams into an integrated electronic public health dashboard could provide decision-makers with timely information during public health emergencies.</p></div></front></TEI><pubmed><MedlineCitation Status="MEDLINE" Owner="NLM"><PMID Version="1">21370781</PMID><DateCompleted><Year>2011</Year><Month>04</Month><Day>19</Day></DateCompleted><DateRevised><Year>2020</Year><Month>02</Month><Day>05</Day></DateRevised><Article PubModel="Print"><Journal><ISSN IssnType="Print">0008-4263</ISSN><JournalIssue CitedMedium="Print"><Volume>101</Volume><Issue>6</Issue><PubDate><MedlineDate>2010 Nov-Dec</MedlineDate></PubDate></JournalIssue><Title>Canadian journal of public health = Revue canadienne de sante publique</Title><ISOAbbreviation>Can J Public Health</ISOAbbreviation></Journal><ArticleTitle>Automated mortality surveillance in south-eastern Ontario for pandemic influenza preparedness.</ArticleTitle><Pagination><MedlinePgn>459-63</MedlinePgn></Pagination><Abstract><AbstractText Label="BACKGROUND" NlmCategory="BACKGROUND">The recent Canadian experience with pandemic H1N1 (pH1N1) influenza in 2009 highlighted the need for enhanced surveillance at local and regional levels to support evidence-based decision making by physicians and public health. We describe the rationale, methodology, and provide preliminary findings from the implementation of an automated Mortality Surveillance System (MSS) in the Kingston, Frontenac and Lennox & Addington (KFL&A) health unit.</AbstractText><AbstractText Label="METHODS" NlmCategory="METHODS">The MSS utilized an automated web-based framework with secure data transfer. A data sharing agreement between the local Medical Officer of Health and the City of Kingston facilitated weekly updates of mortality data. Deaths due to influenza were classified using keywords in the cause of death and a phonetic algorithm to capture alternate spellings. Anomaly detection was modeled on the modified cumulative sum algorithm implemented in the Early Aberration Reporting System.</AbstractText><AbstractText Label="RESULTS" NlmCategory="RESULTS">Retrospective analysis of municipal mortality data over a 10-year period established baseline mortality rates in the region. MSS data monitored during the pH1N1 influenza season showed no significant impact on the burden or timing of mortality in the KFL&A health unit.</AbstractText><AbstractText Label="CONCLUSION" NlmCategory="CONCLUSIONS">Municipal data enabled surveillance of mortality in the KFL&A region with weekly updates. Other municipalities may participate in this surveillance project using the Kingston model without significant ongoing investment. Efforts to improve data quality at the physician and transcription level are ongoing. Integration of mortality data and other real-time data streams into an integrated electronic public health dashboard could provide decision-makers with timely information during public health emergencies.</AbstractText></Abstract><AuthorList CompleteYN="Y"><Author ValidYN="Y"><LastName>Fan</LastName><ForeName>Cary</ForeName><Initials>C</Initials><AffiliationInfo><Affiliation>Queen's University, Kingston, ON. cary.fan@queensu.ca</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>van Dijk</LastName><ForeName>Adam</ForeName><Initials>A</Initials></Author><Author ValidYN="Y"><LastName>Fernando</LastName><ForeName>Dillan</ForeName><Initials>D</Initials></Author><Author ValidYN="Y"><LastName>Hall</LastName><ForeName>Justin N</ForeName><Initials>JN</Initials></Author><Author ValidYN="Y"><LastName>Wynn</LastName><ForeName>Aaron</ForeName><Initials>A</Initials></Author><Author ValidYN="Y"><LastName>Gemmill</LastName><ForeName>Ian</ForeName><Initials>I</Initials></Author><Author ValidYN="Y"><LastName>Moore</LastName><ForeName>Kieran Michael</ForeName><Initials>KM</Initials></Author></AuthorList><Language>eng</Language><PublicationTypeList><PublicationType UI="D016428">Journal Article</PublicationType><PublicationType UI="D013485">Research Support, Non-U.S. Gov't</PublicationType></PublicationTypeList></Article><MedlineJournalInfo><Country>Switzerland</Country><MedlineTA>Can J Public Health</MedlineTA><NlmUniqueID>0372714</NlmUniqueID><ISSNLinking>0008-4263</ISSNLinking></MedlineJournalInfo><CitationSubset>IM</CitationSubset><MeshHeadingList><MeshHeading><DescriptorName UI="D004196" MajorTopicYN="N">Disease Outbreaks</DescriptorName><QualifierName UI="Q000517" MajorTopicYN="Y">prevention & control</QualifierName></MeshHeading><MeshHeading><DescriptorName UI="D006801" MajorTopicYN="N">Humans</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D053118" MajorTopicYN="N">Influenza A Virus, H1N1 Subtype</DescriptorName><QualifierName UI="Q000302" MajorTopicYN="N">isolation & purification</QualifierName></MeshHeading><MeshHeading><DescriptorName UI="D007251" MajorTopicYN="N">Influenza, Human</DescriptorName><QualifierName UI="Q000401" MajorTopicYN="Y">mortality</QualifierName><QualifierName UI="Q000517" MajorTopicYN="Y">prevention & control</QualifierName></MeshHeading><MeshHeading><DescriptorName UI="D009864" MajorTopicYN="N" Type="Geographic">Ontario</DescriptorName><QualifierName UI="Q000453" MajorTopicYN="N">epidemiology</QualifierName></MeshHeading><MeshHeading><DescriptorName UI="D011159" MajorTopicYN="N">Population Surveillance</DescriptorName><QualifierName UI="Q000379" MajorTopicYN="Y">methods</QualifierName></MeshHeading><MeshHeading><DescriptorName UI="D011635" MajorTopicYN="N">Public Health Administration</DescriptorName><QualifierName UI="Q000379" MajorTopicYN="N">methods</QualifierName></MeshHeading><MeshHeading><DescriptorName UI="D040442" MajorTopicYN="N">Public Health Informatics</DescriptorName><QualifierName UI="Q000379" MajorTopicYN="Y">methods</QualifierName></MeshHeading></MeshHeadingList></MedlineCitation><PubmedData><History><PubMedPubDate PubStatus="entrez"><Year>2011</Year><Month>3</Month><Day>5</Day><Hour>6</Hour><Minute>0</Minute></PubMedPubDate><PubMedPubDate PubStatus="pubmed"><Year>2011</Year><Month>3</Month><Day>5</Day><Hour>6</Hour><Minute>0</Minute></PubMedPubDate><PubMedPubDate PubStatus="medline"><Year>2011</Year><Month>4</Month><Day>20</Day><Hour>6</Hour><Minute>0</Minute></PubMedPubDate></History><PublicationStatus>ppublish</PublicationStatus><ArticleIdList><ArticleId IdType="pubmed">21370781</ArticleId><ArticleId IdType="pmc">PMC6974207</ArticleId></ArticleIdList><ReferenceList><Reference><Citation>Am J Epidemiol. 2004 Sep 1;160(5):492-502</Citation><ArticleIdList><ArticleId IdType="pubmed">15321847</ArticleId></ArticleIdList></Reference><Reference><Citation>CJEM. 2008 Mar;10(2):114-9</Citation><ArticleIdList><ArticleId IdType="pubmed">18371248</ArticleId></ArticleIdList></Reference><Reference><Citation>MMWR Recomm Rep. 2004 May 7;53(RR-5):1-11</Citation><ArticleIdList><ArticleId IdType="pubmed">15129191</ArticleId></ArticleIdList></Reference><Reference><Citation>Public Health Nurs. 2008 Nov-Dec;25(6):565-75</Citation><ArticleIdList><ArticleId IdType="pubmed">18950421</ArticleId></ArticleIdList></Reference><Reference><Citation>Commun Dis Intell Q Rep. 2008 Dec;32(4):435-42</Citation><ArticleIdList><ArticleId IdType="pubmed">19374272</ArticleId></ArticleIdList></Reference><Reference><Citation>CMAJ. 1998 May 19;158(10):1317-23</Citation><ArticleIdList><ArticleId IdType="pubmed">9614825</ArticleId></ArticleIdList></Reference><Reference><Citation>Stat Med. 1989 Mar;8(3):323-9; discussion 331-2</Citation><ArticleIdList><ArticleId IdType="pubmed">2540519</ArticleId></ArticleIdList></Reference></ReferenceList></PubmedData></pubmed><affiliations><list><country><li>Canada</li></country></list><tree><noCountry><name sortKey="Fernando, Dillan" sort="Fernando, Dillan" uniqKey="Fernando D" first="Dillan" last="Fernando">Dillan Fernando</name><name sortKey="Gemmill, Ian" sort="Gemmill, Ian" uniqKey="Gemmill I" first="Ian" last="Gemmill">Ian Gemmill</name><name sortKey="Hall, Justin N" sort="Hall, Justin N" uniqKey="Hall J" first="Justin N" last="Hall">Justin N. Hall</name><name sortKey="Moore, Kieran Michael" sort="Moore, Kieran Michael" uniqKey="Moore K" first="Kieran Michael" last="Moore">Kieran Michael Moore</name><name sortKey="Van Dijk, Adam" sort="Van Dijk, Adam" uniqKey="Van Dijk A" first="Adam" last="Van Dijk">Adam Van Dijk</name><name sortKey="Wynn, Aaron" sort="Wynn, Aaron" uniqKey="Wynn A" first="Aaron" last="Wynn">Aaron Wynn</name></noCountry><country name="Canada"><noRegion><name sortKey="Fan, Cary" sort="Fan, Cary" uniqKey="Fan C" first="Cary" last="Fan">Cary Fan</name></noRegion></country></tree></affiliations></record>Pour manipuler ce document sous Unix (Dilib)
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